Hi again,

I'll just suggest once more that you let go of the idea that you must load all your data into an in-memory hash in order for your program to be fast. For one very fast approach please look at mce_map_f in MCE::Map (also by the learned marioroy) which is written especially for optimized parallel processing of huge files.

(As an aside, have you profiled your code? I would think that Perl could load data from anywhere (file, database, whatever) faster than a shell call to an external analytical program would return ... or does your program not expect a response?)

As far as your finding that

"parallelisation of the code after loading the hashes ... turned out slowing down the process or impossible because it would duplicate the hash"
... please see MCE::Shared::Hash.

Hope this helps!


The way forward always starts with a minimal test.

In reply to Re^3: System call doesn't work when there is a large amount of data in a hash by 1nickt
in thread System call doesn't work when there is a large amount of data in a hash by Nicolasd

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.