I can't reproduce your or
Ikegami's problem, works fine for me.¹
DB<124> $a=42; $a =~ s/(.)(.)/(sort { $a <=> $b } $1,$2)[0]/e ;$a
=> 2
DB<125> $a=42; $a =~ s/(.)(.)/(sort { $a <=> $b } "$1","$2")[0]/e ;$
+a
=> 2
# UPDATE with /g flag
DB<107> $a=4215; $a =~ s/(.)(.)/(sort { $a <=> $b } $1,$2)[0]/eg ;$a
=> 21
DB<108> $a=4215; $a =~ s/(.)(.)/(sort { $a <=> $b } "$1","$2")[0]/eg
+ ;$a
=> 21
Maybe your match part isn't doing what you think it should?
Otherwise which Perl version are you using?
mine:
$ perl -v
This is perl 5, version 14, subversion 2 (v5.14.2) built for i686-linu
+x-gnu-thread-multi-64int
¹) though I agree with others that this approach is overly complicated.
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