You can redirect stdout to stderr within your program using BEGIN{ open STDOUT, '>&STDERR' }; then both will come out interleaved via the unbuffered stderr; and you only need 2>file in order to put everything in a file:
E:\primes>perl -Mstrict -wE"BEGIN{ open STDOUT, '>&STDERR';} say 'hi';
+ warn 1; say 'this is fun'; warn 2; say 'bye'" 2>log
C:\test>type log
hi
1 at -e line 1.
this is fun
2 at -e line 1.
bye
Note: I think that if you do this at the top of your main script, before you use any modules, their output will also be redirected, but I didn't create a module with warnings to try it.
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