Aaron File infile few lines are chr10 40095550 40096075 chr10 40102275 40102575

second infile few lines are chr1 mm10_knownGene exon 3205904 3207317 0.000000 - . gene_id "uc007aet.1"; transcript_id "uc007aet.1"; chr1 mm10_knownGene exon 3213439 3215632 0.000000 - . gene_id "uc007aet.1"; transcript_id "uc007aet.1";

output should be for matching chr,start,end of first file with that of second file.

In reply to Re^3: Compare three columns of one file with three columns of another file in perl by anonym
in thread Compare three columns of one file with three columns of another file in perl by anonym

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