I'm sorry code works this is my first HTML post, this line is printing an extra + but I have to go home from work now

#!/usr/bin/perl @coords_i=();@coords_j=(); open (IN,"CONTCAR"); open (OUT,">OUTPUT"); $k=$go=$i=0; while($line=<IN>){ $lines[$i]=$line; $i++; } for ($j=0;$j<$i;$j++){ $go++ if $lines[$j]=~/Direct/; $go=0 if $lines[$j]=~/0.00000000E/; if ($go>0){ if(($x,$y,$z)=$lines[$j]=~/^\s*([-+]?\d+\.\d+)\s+([-+]?\d+\.\d+)\s+([- ++]?\d+\.\d+)/){ $coords_i[$k]=sprintf("%.5f:%.5f:%.5f",$x,$y,$z); $coords_j[$k]=sprintf("%.5f:%.5f:%.5f",$x,$y,$z); $k++; } } } $n=1; foreach $atom (@coords_i){ print OUT "ATOM$n: $atom\n"; foreach $atom1 (@coords_j){ unless($atom eq $atom1){ ($x,$y,$z) = split(/:/,$atom); ($x1,$y1,$z1) = split(/:/,$atom1); &distance; } } $n++; } sub distance { $a1=($x1-$x);$b1=($y1-$y);$c1=($z1-$z); $r1=sqrt(($a1*$a1)+($b1*$b1)+($c1*$c1)); $distance=sprintf("%.5f",$r1); print OUT "$atom to $atom1\nDistance $distance\n"; } close (OUT); print STDERR "Done.\n";

In reply to Re: XYZ Manipulation by segaknight
in thread XYZ Manipulation by jcklasseter

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.