Store the raw data in an array of arrays. Store the duplicate information in a hash. Combine type and position to form a single key. The value is a reference to an array of indicies into the raw data.
use strict;
use warnings;
my @raw_data;
my %dups;
my $i = -1;
<DATA>; # skip header
while (my $line = <DATA>) {
my ($id, $type, $pos) = split /\s+/, $line;
$raw_data[++$i] = [$id, $type, $pos];
my $key = "$type:$pos";
$dups{$key} = [] if !exists $dups{$key};
push @{$dups{$key}}, $i;
}
foreach my $entry (@raw_data) {
my $key = "$entry->[1]:$entry->[2]";
print "@$entry\n" if (@{$dups{$key}} > 1);
}
__DATA__
ID Type Pos
1 1 10
2 1 11
3 1 11
4 1 15
5 2 5
6 2 5
OUTPUT:
2 1 11
3 1 11
5 2 5
6 2 5
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