Hello karthik248,
I do not have any experience on Perl and Matrix. I did some research online and I found (PDL::Matrix, PDL::MatrixOps, PDL::NiceSlice).
These modules should be a good start for what you want to achieve, create a sample of code and a sample of input and output for all of us "not experienced" with matrices to replicate your problem and possibly try to find a solution to your problem.
Update: What about (PDL::Interpolate)?
Update2: What about (PDL::Primitive)?
Hope this helps, or at least gives you new ideas on how to proceed with your problem.
Seeking for Perl wisdom...on the process of learning...not there...yet!
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