You've been given good answers already, but here's how you could do it if you wanted to write the code rather than using a module or a built-in such as the glob function:

$ perl -e 'use strict;
> use warnings;
>
> my @array = qw(A T C G);
> my $length = 5;
> my @result = @array;
>
> add_to_strings($length - 1);
> print "@result";
>
>
> sub add_to_strings {
>     my $len = shift;
>     return if $len <= 0;
>     my @temp;
>     for my $string (@result) {
>         push @temp, $string . $_ for @array;
>     }
>     @result = @temp;
>     add_to_strings ($len - 1);
> }
> '
AAAAA AAAAT AAAAC AAAAG AAATA (... many string omitted for brevity ...
+) GGGGA GGGGT GGGGC GGGGG
[download]

Here, the recursive call to add_to_strings is the key for generating arbitrarily nested loops.

You could do it without recursion, but it's likely to be a bit more complicated.

Also note that I have used here a global @result array for simplicity, but you could also pass @result in subroutine calls and returns to make it cleaner.

Update at 15:51 UTC: this is what the cleaner version might look like:

use strict;
use warnings;

my @array = qw(A T C G);
my $length = 5;

my @result = add_to_strings($length - 1, @array);
print "@result";


sub add_to_strings {
    my $len = shift;
    my @temp_result = @_;
    return @temp_result if $len <= 0;
    my @temp;
    for my $string (@temp_result) {
        push @temp, $string . $_ for @array;
    }
    add_to_strings ($len - 1, @temp);
}
[download]

You don't really need the @temp_result here, you could traverse directly @_, I just used @temp_result for better clarity, but this entails quite a bit of extra array copies, which might be inefficient for longer strings.

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