Remove the slashes, extract the modifier ("i") (say, in a variable $flags). Keep the core of the regex as a string, in your example that would be
.*uba$.
Then put "(?$flags:" in front of it, and ")" behind it. You can use that string ($re) directly as a regex:
$re = "(?:$flags:$core)";
if($input =~ $re) { ... }
edit Oops, one too many colons:
$re = "(?$flags:$core)";
if($input =~ $re) { ... }
You can also turn it into a regex object:
$qr = qr/$re/;
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