I switched from Cygwin to MSYS2 about a year ago. I find package management via pacman easier. If you are on Windows 10 there is also the Ubuntu Bash shell, although I have not made much use of that yet so can't comment on it.
That said, I use Strawberry Perl for the bulk of my perl work, and msys2 largely for unix command line tools.
WRT the IDE, I use Komodo. The Edit version is free but lacks key parts of the full IDE's functionality. I don't know how much, though.
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