However, since my XML uses some namespaces it is not possible to parse the file as is

Why not? XML::LibXML supports namespaces. Could you show some representative sample input? See also Short, Self-Contained, Correct Example.

In reply to Re^3: Parsing two XML at the same time and align them by haukex
in thread Parsing two XML at the same time and align them by corfuitl

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