The output from here: 
bash-2.05b$ cat one.seq.one.line.7.19.04
ATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGgcaagagaatcctgagttccaggg
+ctgatgaggg

[download]

bash-2.05b$ perl tt1.pl
ATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGgcaagagaatcctgagttccaggg
+ctgatgaggg
The first occurance of little a is: 48
The first occurance of little c is: 47
The first occurance of little g is: 46
The first occurance of little t is: 55

[download]

bash-2.05b$ cat out.index.7.19.04
ATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGgcaagagaatcctgagttccaggg
+ctgatgaggg
Mon Jul 19 14:08:46 2004
The first occurance of little a is: 48
The first occurance of little c is: 47
The first occurance of little g is: 46
The first occurance of little t is: 55


ATGGACTGCACCTGGAGGATCCTCTTCTTGGTGGCAGCAGCTACAGgcaagagaatcctgagttccaggg
+ctgatgaggg
Mon Jul 19 14:08:46 2004
The first occurance of little a is: 48
The first occurance of little c is: 47
The first occurance of little g is: 46
The first occurance of little t is: 55

[download]


Everything seems fine...

-DBC

In reply to Re: Continueing probles w/ "index" -- more info by danielcid
in thread Continueing probles w/ "index" -- more info by jkmiller

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