I wrote a filter for doxygen so it could be used on perl code with suitable comments.
See http://smop.org/computing/perl/doxygen.html
It really helps if you know C++ when using it, because the comments you have to place in front of your code are basically a translation from perl to C++ function prototypes.
Take a look at the generated demo docs, at the source perl code and decide whether it's sufficiently "better" for you than POD.
For most perl code, I think POD wins, but DoxyGen::Filter could be useful if you program in a heavy OO, java-like style.
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