...the list you built meant my code was trying to match all _4_ digit fuzzy strings, and not the _2_ digits we were originally discussing...
01234567890
AAAAAAAAAA
AAAAAAAAAAA
========== Offset 0 -- 0 mismatches.
01234567890
AAAAAAAAAA
AAAAAAAAAAA
========== Offset 1 -- 0 mismatches.
01234567890
CCAAAAAAAA
AAAAAAAAAAA
xx======== Offset 0 -- 2 mismatches.
12345678901
CCAAAAAAAA
AAAAAAAAAAA
xx======== Offset 1 -- 2 mismatches.
## 806 other 2-mismatch matches your code fails to find
12345678901
AAAAAAAATT
AAAAAAAAAAA
========xx Offset 0 -- 2 mismatches.
12345678901
AAAAAAAATT
AAAAAAAAAAA
========xx Offset 1 -- 2 mismatches.
QED. 2 not 4.
Perhaps you should try this
Update: And don't you realise that the list of 4 character mismatches would include all of the 2-char mismatches? And the 1-char mismatches? And the 3-char mismatches? And you code found what? Just TWO exact matches...pull the other one.
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