what happens if you replace 
foreach my $fid(@fileid)
{
    print "$fid ";      ##Shows e.g. 1 1  9 4 8 5 6 0
}

[download]
with 
for (my $i=0; $i<length($line[0]); $i++)
{
    $fid = substr($line[0], $i, 1);
    print "$fid ";
}

[download]
same error?

In reply to Re: Splitting a string is giving me gaps in my array by holli
in thread Splitting a string is giving me gaps in my array by jenand

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