Hello all,
Im not sure if this is right but can you please check this code to see if it does what i think it should do....

The only thing is that im not entirely sure if these few lines are all i need to be able to read a DNA sequence file, extarct the sequences only and save them into an array.

sub get_File_Data()
{
  my $web = new CGI;
  my $filehandle = $web->upload('upload');
  my @file = <$filehandle>;
  my @sequences;
  
  my $seqIO = Bio::SeqIO->new(-fh => \*$filehandle, -format=>$format);
  my $fh = Bio::SeqIO->newFh(-fh => \*$filehandle, -format=>$format);

  my $sequence;
  
  while($fh != -1)
  {
   $sequence = stream->next_seq
   @sequences = $sequence;
  }

}

[download]

I would be very grateful for any replies.
MonkPaul.

In reply to Not sure about Bio::SeqIO by MonkPaul

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