Thanks GrandFather, but it produce this instead: 
$VAR1 = {
          'mus09r' => [
                        [
                          [
                            'AGAGAAAG 1',
                            '7',
                            '0.142138988325903',
                            '3',
                            '0',
                            [
                              '7.66666666666667',
                              '1,-424,CAGAGACAGGGGAGAGATAG',
                              '1,-338,AAGAGAAAGGGAGGAGAGGC',
                              '1,-349,AAGAGGGGAGGAAGAGAAAG'
                            ]
                          ],
                          [
                            'AGAGAAAG 1',
                            '7',
                            '0.142138988325903',
                            '3',
                            '0',
                            [
                              '7.66666666666667',
                              '1,-337,AGAGAAAGGGAGGAGAGGCA',
                              '1,-348,AGAGGGGAGGAAGAGAAAGG',
                              '1,-423,AGAGACAGGGGAGAGATAGA'
                            ]
                          ]
                        ],
                        [
                          $VAR1->{'mus09r'}[0][0],
                          $VAR1->{'mus09r'}[0][1],
                          [
                            'AGAAACAG 1',
                            '7',
                            '1.36112386682747',
                            '4',
                            '4',
                            [
                              '7.66666666666667',
                              '1,-383,TGAGAAACAG',
                              '1,-319,CAAGAAACAG',
                              '0,-457,CTTGAAACAG'
                            ]
                          ]
                        ]
                      ]
        };

[download]
Which is still not quite right.

Regards,
Edward

In reply to Re^2: Problem of Duplicating an Array while Parsing Text by monkfan
in thread Problem of Duplicating an Array while Parsing Text by monkfan

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