The problem with doing this with a regex is you don't know whether or not there are multiple repeating substrings, and if there are, which has the most repeats. This is much better suited to a linear / hash approach, perhaps something like the following:
use strict;
use warnings;
my (%count, $str, $size, $min);
$str = 'abczdefzabcghijklzabczaerabrtyuabcethdauthabkudiabc';
$size = 3; # Size of substrings to look for
$min = 2; # Minimum number of times substring appears
$count{substr($str, $_, $size)}++ for 0..(length($str) - $size);
for (sort {$count{$b} <=> $count{$a} || $a cmp $b} keys %count) {
last if $count{$_} < $min;
print "$_ :";
print ' '.(pos($str)-$size) while $str =~ /$_/g;
print " ($count{$_} matches)\n";
}
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