Hi monks !

I found the explanation of a bug but don't know how to resolve it !!

I'm using a perl API from ensembl (it's an API to deal with the genomic annotation of genomes) and for each release of the ensembl database, they release a new API that reflects changes in the DB structure, so your code still works.
In brief, you HAVE TO use the same API version as the genome version you want to use.

In my case, i want to offer to the user the choice of the genome version to use. A form is posted to my script, and then i was trying to do something like that :
my $version = "something from the post" use lib "/commun_path/$verion/ensembl/modules"; use Bio::EnsEMBL::Registry;
Of course, that doesn't work because $version isn't initialized at compile time. But I can't get the version from the post before runtime, so is there a way to do that ?
Thanks,

Marcel

In reply to dealing with RUNTIME, COMPILE TIME and use lib ... by Marsel

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.