hi JohnGG, U r correct and also i am sorry i don't know how to view the previous question nodes so that only i had created a new node, but right know i had known the way to view the previous node, and my problem is if the pattern occurs more than once in a single array then it's not coloring that part if patter in like 'SSS' and the matching position in that array is 'SSSSSSSSSSSSS' than the entier 'SSS' should be colored for me. example 
MMRGFKQRLI KKTTGSSSSS SSKKKDKEKE KEKSSTTSST SKKPASASSS SHGTTHSSAS STGS
+KSTTEK GKQSGSVPSQ GKHHSSSTSK TKTATTPSSS SSSSRSSSVS RSGSSSTKKT SSRKGQE
+QSK QSQQPSQSQK QGSSSSSAAI MNPTPVLTVT KDDKSTSGED HAHPTLLGAV SAVPSSPISN
+ ASGTAVSSDV ENGNSNNNNM NINTSNTQDA NHASSQSIDI PRSSHSFERL PTPTKLNPDT DL
+ELIKTPQR HSSSRFEPSR YTPLTKLPNF NEVSPEERIP LFIAKVDQCN 
TMFDFNDPSF DIQGKEIKRS TLDELIEFLV TNRFTYTNEM YAHVVNMFKI NLFRPIPPPV NPVG
+DIYDPD EDEPVNELAW PHMQAVYEFF LRFVESPDFN HQIAKQYIDQ DFILKLLELF DSEDIRE
+RDC LKTTLHRIYG KFLSLRSFIR RSMNNIFLQF IYETEKFNGV AELLEILGSI INGFALPLKE
+ EHKVFLVRIL IPLHKVRCLS LYHPQLAYCI VQFLEKDPLL TEEVVMGLLR YWPKINSTKE IM
+FLNEIEDI FEVIEPLEFI KVEVPLFVQL AKCISSPHFQ VAEKVLSYWN 
NEYFLNLCIE NAEVILPIIF PALYELTSQL ELDTANGEDS ISDPYMLVEQ AINSGSWNRA IHAM
+AFKALK IFLETNPVLY ENCNALYLSS VKETQQRKVQ REENWSKLEE YVKNLRINND KDQYTIK
+NPE LRNSFNTASE NNTLNEENEN DCDSEIQ

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in the above exaple output the patter 'SSS' should be colored until it matches 'SSS'in that array but it colors only 'SSS' if the pattern is other than 'SS' such as 'AAAA' then it should color the given pattern as 'AAA' and also other pattern like 'AAAAA' and so on.but it should color the patterns which have equal length and also greater than the orignal pattern length if u not able to understand , please reply me immediately,

In reply to Re^2: coloring patterns of an array by Tony1
in thread coloring patterns of an array by Tony1

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