If you're just golfing, you can throw away a few characters:
perl -e 'for$c(sort{$a<=>$b}map/(\d+)$/,<*[0-9]>){++$n==$c||print map"
+$_\n",$n..$c-1;$n=$c}'
If you want to get rid of the sort, try an array:
perl -le '@f=map/(\d+)$/,<*[0-9]>;@x[@f]=@f;for(1..$#x){$x[$_]||print}
+'
Note that if you have a file named '0', it will basically ignore it, but that was the original behavior too. This may eat more memory, but I doubt that will be an issue until you're working with millions of files.
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