Just a guess, but CPAN may be looking for cl.exe because it found nmake in your path. For MinGW/gcc, you should be using dmake rather than MSVC's nmake and cl. Among other places, you can find dmake on CPAN.

In reply to Re^3: Installing CPAN on a Windows system by SankoR
in thread Installing CPAN on a Windows system by GrandFather

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