ref    agctagctagctagcatgctagctagctgatcgatgctagctagctgactgacgacg
out1       atctagcat                    agctagcgatcga    gactgacagc
out2                             tagctagctgctagc
out3                       agtcgatcgatgctagc

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How do you define a match? I wouldn't say any of those strings matched anywhere.
Unless I state otherwise, all my code runs with strict and warnings

In reply to Re: formatting output question (use of recursive subroutine?) by FunkyMonk
in thread formatting output question (use of recursive subroutine?) by rogerd

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