You have a Hash-of-Arrays structure. One way is to dereference each array, then loop through the arrays, comparing each element: 
use strict;
use warnings;

my %hash = (
    key1 => [qw(a b c d e f)],
    key2 => [qw(a c d e f)]
);

my @a1 = @{$hash{key1}};
my @a2 = @{$hash{key2}};

for my $i (0 .. $#a1) {
    unless (exists $a2[$i]) { 
        print "No match for $a1[$i]\n";
        next;
    }
    if ($a1[$i] eq $a2[$i]) {
        print "equal: $a1[$i], $a2[$i]\n";
    }
    else {
        print "not equal: $a1[$i], $a2[$i]\n";
    }
}

__END__

equal: a, a
not equal: b, c
not equal: c, d
not equal: d, e
not equal: e, f
No match for f

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In reply to Re: compare values within hash by toolic
in thread compare values within hash by Anonymous Monk

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