I'm not in a place where I can test this, but try: 
script -c 'perl -d myscript.pl' logfile.txt

[download]
It will log the whole debugging session.

In reply to Re: Perl Debugger capturing output from the 'x' command while in a debug session by quester
in thread Perl Debugger capturing output from the 'x' command while in a debug session by x5150

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