As a quick-start, you could wrap the interactive part like so:
...
if (@ARGV) { # test if there is at least one argument
$basename = $ARGV[0]; # set basename to first argument
} else { # otherwise be interactive
print "Enter base name of input files\n";
chomp ($basename = <STDIN>);
}
...
Now, you can provide the filename as first argument or fall back into interactive mode.
See e.g.
Getopt::Long for another approach. Be careful with
$var = shift; since
it behaves different when called from inside or outside of a subroutine.
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