perl_n00b - Instead of rolling your own FASTA parser, there are good ones already available from BioPerl ( http://www.bioperl.org ) :

    Bio::SeqIO ( docs )
    Bio::SeqIO::FASTA
    etc...

Edit: Title and text - I meant this to be in reply to perl_n00b not JadeNB (thanks to JadeNB for pointing this out!)

Just a something something...

In reply to Re: Pattern Match Issue by BioLion
in thread Pattern Match Issue by perl_n00b

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