Thanks for the quick response and information, I did make all the changes you recommended and it did not make a difference (please forgive any 'code' errors on the example, I had to extract it from our code and re-create it for the question due to a non-disclosure agreement.
As you can see, the first 'site' is nice, and the one I just added in my test is not (in fact the </sites> has also lost it's linefeed in the process. 

<?xml version="1.0" encoding="UTF-8"?>
<config>
  <sites>
    <site>
      <sitename><![CDATA[www.example.com]]></sitename>
      <active><![CDATA[1]]></active>
      <rooturl><![CDATA[http://www.example.com.com/]]></rooturl>
      <name><![CDATA[Example]]></name>
    </site>
  <site><sitename>Test entry</sitename><name></name><rooturl><![CDATA[
+http://www.test.com.com/]]></rooturl><reportname><![CDATA[test report
+ name]]></reportname></site></sites>
</config>

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Again, this is just a small section of many entries in this file.

In reply to Re^2: xml::libxml open, add and save not formatting properly by itsscott
in thread xml::libxml open, add and save not formatting properly by itsscott

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