This is my attempt,
use strict;
use List::Util qw(min max);
my %hash=();
while(<DATA>)
{
my @fields=split /\s+/;
my $i=0;
push @{${$hash{$fields[0]}{$fields[3]}}->[$i++]},$_ for @fields[1,2,4]
+;
}
foreach my $hkey1 (keys %hash)
{
foreach my $hkey2 (keys %{$hash{$hkey1}})
{
print join "\t",$hkey1,$hkey2,min(@{${$hash{$hkey1}{$hkey2}}->
+[0]}),max(@{${$hash{$hkey1}{$hkey2}}->[1]}),max(@{${$hash{$hkey1}{$hk
+ey2}}->[2]}),"\n";;
}
}
__END__
chrX 2680092 2744539 XG 1
chrX 2680090 2744529 XG 2
chrX 2680080 2744519 XG 3
chrX 2680070 2744509 XG 4
chrX 2680070 2744509 DT 1
chrX 2680090 2744519 DT 2
~suhail
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