Obviously. The only reason I'm using coordinates that start from 1, not zero, is to be consistent with the input and output formats I'm using.
These are biological data, and the unfortunate convention in all biological databases I'm familiar with is to start counting from 1. The first position in any genome is 1. If I used zeros, I would have to remember converting between the two systems each time I input/output and from experience, I quickly forget doing that...
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