$ echo ">gi|209483500:3405-4275 [Homo sapiens] gene X, complete ATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCAATGGCATTCCTAATGCTT >gi|209483501:3307-4262 [Pan paniscus] gene X, complete AACGAAAAATTCTAGGCTATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTACA >gi|209483502:3600-4187 [Mus musculus] gene X, complete TAAACACCCTCACCACTACAATCTTCCTAGGAACAACATATGACGCACTCTCCCCTGAACTCTACACAAC +GGATGCT >gi|209483502:3600-4187 [Canis familiaris] gene X, complete ATATTTTGTCACCAAGACCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACCCCCGATTC >gi|209483502:3600-4187 [Rattus norvegicus] gene X, complete CGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCCTAGCATTACTTATATGAT +CGATTTT " | perl -ne'$hash{$1}=<>=~tr/CG//if/\[([^][]+)]/}{print map">$_\n$has +h{$_}\n\n",sort keys%hash' >Canis familiaris 30 >Homo sapiens 30 >Mus musculus 36 >Pan paniscus 33 >Rattus norvegicus 31
In reply to Re: Hash help for biologist
by jwkrahn
in thread Hash help for biologist
by utterlyconfused
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