Hi Monks I'm looking for a resource where I can find code for a dot-plot that incorporates a substitution matrix (e.g. Blosum) and includes a threshold and window size. I saw Dottup on Bio-perl but I'm not sure how to import it and I also would like to see the code itself to be able to incorporate it into my existing code. Any help would be greatly appreciated

In reply to Bioinformatics help please by egorleg

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