my %hash = ();
my $line = "";
What do those two mean?? why do people do this?
Update
sub readfasta {
my $ifn = shift;
my $IFH;
open($IFH, "<$ifn") or die "cannot open file $ifn\n";
my $line;
my %ret;
my $tot = 0;
while($line = <$IFH> ){
chomp $line;
if(not($line eq "")) { ##### why does $line equal "" ?
my @tmp = split(//,$line);
if($tmp[0] eq ">") {
my $nm = substr($line,1);
$nm = $nm . $tot;
$tot++;
$line = <$IFH>;
chomp $line;
$ret{$nm} = $line;
}
}
}
close($IFH);
return(\%ret);
}
what does $line = ""; mean?
Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
Read Where should I post X? if you're not absolutely sure you're posting in the right place.
Please read these before you post! —
Posts may use any of the Perl Monks Approved HTML tags:
- a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
| |
For: |
|
Use: |
| & | | & |
| < | | < |
| > | | > |
| [ | | [ |
| ] | | ] |
Link using PerlMonks shortcuts! What shortcuts can I use for linking?
See Writeup Formatting Tips and other pages linked from there for more info.