You can replace the whole if-elsif paragraph with just
my %count_of;
if (/([ACDEFGHIKLMNPQRSTVWY])/) {
$count_of{$1}++
}
As for the result, do not use double quotes around arithmetical operations. With the hash suggested above you can just:
print RESULT join ' ',
$id,
map $count_of{$_}/$tt, qw/A C D E F G H I K L M N P Q R S T V W Y/
+;
print "\n";
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