If memory really is a problem (and I doubt it from the numbers you gave), you can could use
for (0..$#line2) {
my $i = $line2[$_];
for (0..$#line1) {
my $j = $line1[$_];
print $i if if $i eq $j;
}
}
If memory isn't a problem, you can use a much faster solution:
my %lookup;
++$lookup{$_} for @line2;
for (@line1) {
print if $lookup{$_};
}
Finally, you might want to get rid of duplicate messages.
my %lookup;
$lookup{$_} = -1 for @line2;
for (@line1) {
print if !++$lookup{$_};
}
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