Hey guys, I'm trying to figure out how to pass a bash variable to a perl command line executable.

for i in 1 2 3 4 5 6 7 10 11 12; do perl -lane 'print p${i}. "\t$_"' p${i}.chr7.miRNA.txt; done

The idea is just to have each file be edited to include the "p" number as the first column. The files are set up as p*.chr7.miRNA.txt where the * corresponds to the patient number. Any help would be great! Thanks!

In reply to bash loop passing to perl command line by ZWcarp

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