in reply to Re: Regexps for microsatellites
in thread Regexps for microsatellites

In this case it's definitely the (CAT)7, as if the pattern can be broken down into identical parts then it is treated as a smaller microsatellite. I have some code to do that, e.g.
my $v1 = substr($match, 0, 1); my $v2 = substr($match, 1, 1); next if ($match =~ /^($v1$v2){2,}$/);