in reply to generate regular expression

This looks suspicously like bioperl territory. and you are looking at something of an app here. download bioperl. read the docs. think about the problem space.

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Re^2: generate regular expression
by khoueiry (Initiate) on Mar 30, 2006 at 16:56 UTC
    Thanks a lot,
    I already know bioperl and its packages. There is no package in bioperl to treat that. I'm posting in perlmonks to "seek perl wisdom" on that issue.