You could have a shell script call perl for you with command-line arguments.

On most Unix-alikes under Bourne or bash:

#!/bin/sh
/usr/local/bin/perl -MMyIncludes $@
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On Windows using Strawberry under cmd :

@"\strawberry\perl\bin\perl" -MMyIncludes %*
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These of course assume fairly standard installation paths. You'll need to change those to match your system. You'd have a new way to call perl, but that way would implicitly include any module or modules you like. The remainder of any command-line arguments are passed on to perl itself in both cases.