How to extract SNPs from a data base

kayj has asked for the wisdom of the Perl Monks concerning the following question:

Hi All, I have several regions on the genome each is defined with the start and the end base pair position. I am looking into using HapMap http://hapmart.hapmap.org/BioMart/martview to extract the SNPs in these region given a population. Is there a way to do that? Any help will be greatly appreciated Thanks

Comment on How to extract SNPs from a data base

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Re: How to extract SNPs from a data base by Anonymous Monk on Jun 08, 2009 at 14:46 UTC
Try the asking on BioPerl mailing list, they're likely to know what is SNPs. Bio::PopGen::IO::hapmap?	[reply]