in reply to How Do I Get the Last 20 Nucleotides In A FASTA Subsequence?
so I guess# gets sequence as a string from sequence object $seqstr = $seqobj->seq(); # actual sequence as a string $seqstr = $seqobj->subseq(10,50); # slice in biological coordina +tes $seqobj->length() # length
$segstr = $segobj->subseg( $segobj->length - 20, $segobj->length );
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Re^2: How Do I Get the Last 20 Nucleotides In A FASTA Subsequence?
by vikuuu (Novice) on Mar 10, 2010 at 16:54 UTC |