Re^2: string manipulation with Regex

in reply to Re: string manipulation with Regex
in thread string manipulation with Regex

Thanks bluecompassrose for your help... (also thank you for posting the bwa file input for me - you wrote 'output' instead) but I am not sure if it is efficient for millions of sequences (basically >2GB of text files).. Any efficient ideas? please let me know.

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Re^3: string manipulation with Regex by bluecompassrose (Initiate) on Sep 02, 2010 at 16:10 UTC
Haha, yup. I'm terrible at perl. Java programmer at heart =P. That said, take a look at Marshall's code and my comment above, it should work for what you want it to do o.ob	[reply]

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