in reply to Re: comparing data btwn 2 files
in thread comparing data btwn 2 files

^^my data in the .txt file is something like this:
Bacteroides thetaiotaomicron C00267 5.3.1.9 C00668 Bacteroides thetaiotaomicron C00221 5.3.1.9 C01172 Bacteroides thetaiotaomicron C00074 5.3.1.9 C00022 Bacteroides thetaiotaomicron C00221 5.3.1.1 C00267 Parabacteroides Distasonis C02876 2.7.2.1 C00163
Homosapiens C00267 2.7.1.2 C00668 Homosapiens C00267 5.1.3.3 C00221 Homosapiens C00221 5.1.3.3 C00267 Homosapiens C00221 2.7.1.2 C01172 Homosapiens C00221 2.7.1.1 C01172 Homosapiens C00668 5.3.1.9 C01172 Homosapiens C01172 5.3.1.9 C00668 Homosapiens C00668 5.3.1.9 C05345 Homosapiens C05345 5.3.1.9 C00668
i want to compare the second, third and fourth columns in the 2 files..and find the matches.

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Re^3: comparing data btwn 2 files
by tospo (Hermit) on May 12, 2011 at 08:20 UTC
    ok, if yuo only need the matches and don't need to know which elements are only in the bacterium or only in human then your approach will be sufficient.