in reply to Re: manipulating alignment data
in thread manipulating alignment data

oops, yes should put the <F> before the while loop, thanks.

the correct output,should be:

position 2 is not conserved position 3 is not conserved position 5 is not conserved position 6 is not conserved position 8 is not conserved

i am getting that all positions EXCEPT position 4 are conserved.