in reply to Another Reverse Complement Question...

It might be that tr (see Quote and Quote like Operators) will perform your reverse complement.

knoppix@Microknoppix:~$ perl -E ' > $seq = q{ACTGTGGCGTCAACTG}; > say $seq; > ( $revSeq = $seq ) =~ tr{ATCG}{TAGC}; > say $revSeq;' ACTGTGGCGTCAACTG TGACACCGCAGTTGAC knoppix@Microknoppix:~$

I hope this is helpful.

Cheers,

JohnGG