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Input file1:

...
BBCDI   DND1    19.44   0.2833
BBCDI   SOHLH2  36.61   0.2909
DND1    SOHLH2  18      0.8

Input file2:

chr8     18640000   18960000    ZGLP1   RRP1B   CDH24  #gene number he
+re is not fixed can be #4 #5 or more
chr8     19000000   19080000    BBCDI   DND1    SOHLH2 #gene number he
+re is not fixed can be #4 #5 or more

output file:

chr8     18640000   18960000    ZGLP1   RRP1B 39.62 0.2972
...
chr8     19000000   19080000    BBCDI   DND1 19.44  0.2833
chr8     19000000   19080000    BBCDI SOHLH2 36.61  0.2909
chr8     19000000   19080000    DND1 SOHLH2 18 0.8

my perl code

...
        }
    }
}