comment on

I think that is too specific. I want to count the occurrences of every element in Genomes_used_Hant.txt that occurs in NRT2.txt. Not just Gloin1

Genomes_used_hant.txt

Laesu1
Patat1
Hydru2
Armost1
Pacta12
VKMF3808
Gaegr1
Corca1
Artol1
Agabivarbur1
Uncre1
Armme11
Suidec1
Aspka11
MagorBR32
Bjead1
Gymlu1
CopciAmutBmut1
Thihy1
Aspgl1
Leugo1
Bacci1
Schoc1
Gloin1
....ext
[download]

NRT2.txt

>ANRT2
MDFAKLLVASPEVNPNNRKALTIPVLNPFNTYGRVFFFSWFGFMLAFLSWYAFPPLLTVTIRDDLDMSQT
+QIANSNIIALLATLLVRLICGPLCDRFGPRLVFIGLLLVGSIPTAMAGLVTSPQGLIALRFFIGILGGT
+FVPCQVWCTGFFDKSIVGTANSLAAGLGNAGGGITYFVMPAIFDSLIRDQGLPAHKAWRVAYIVPFILI
+VAAALGMLFTCDDTPTGKWSERHIWMKEDTQTASKGNIVDLSSGAQSSRPSGPPSIIAYAIPDVEKKGT
+ETPLEPQSQAIGQFDAFRANAVASPSRKEAFNVIFSLATMAVAVPYACSFGSELAINSILGDYYDKNFP
+YMGQTQTGKWAAMFGFLNIVCRPAGGFLADFLYRKTNTPWAKKLLLSFLGVVMGAFMIAMGFSDPKSEA
+TMFGLTAGLAFFLESCNGAIFSLVPHVHPYANGIVSGMVGGFGNLGGIIFAIIFRYSHHDYARGIWILG
+VISMAVFISVSWVRPVPKSQMRE
>Metac1_3189
MGFNISLLWKTPMVDPINKKARSIPVLNVVDPYGRVFFFSWMGFMLGFWAWYTFPPLLTVTIKKDLHLSA
+AEVANSNIVSLCATLLLRFVAGPLCDQFGSRRVYASLLLLGCLPVGLAPLVKTANGLYVSRFFIGILGA
+TFVPCQVWCTGFFDKNIVGTANALSGGWGNAGGGITYFIMPAVFDSLVASQGMAPSKAWRVTFVVPLIC
+LIACALGMLFLCPDTPLGSWEERSQKLQENLDQYSPTSTTAVNTPHILSEPPSRDVEKAEEFDEDSKFY
+KQPSAISLSEAVAIAQAETVVKPSFKDSLPVMLSLQTLFHVATYSCSFGGELAVNSILSSYYKANFPHL
+DQTKASNYAAIFGFLNFVTRPLGGVVADILYRMSGQNLWTKKAWITMAGLLSGALLIIVGKVDPSEANG
+RDIGTMVGLVTVAAFFIEAGNGANFALVPHVYPAANGVLSGCTGGGGNLGGVVFAIIFRFIDHGSGYAT
+ACWVIGVIHIAVNLAVCRIPPLPKGQVGGQ
>MagorUS71_00075311
MGINVKFSDLYRAPEVNPITRKARSIPALNVINMYGRVFFFSWFGFMIAFWAWYTFPPLLTVTIRKDLNL
+TAAEVANSNIVSLVATLFVRMVAGPLCDLWGSRVVFGGVLLVGAIPLGLAPLIQNATGLYVSRFFIGIL
+GGAFVPCQVWSTGFFDKNVVGTANALTGGFGNAGGGITYFIMPAVFDSFVHRMGYTPGQAWRLTFVVPL
+VMIIVTGVSLLLLCPDTPTGKWSERHMHAQQMVGQASTTDATNQDKIVDVPGSITDKGPNASNSSEGNS
+FVEEKEKTRKEKDEQVGELLDAEAGRVIKSDDAAVQNTDTIAKPTFGESLRVMASPQTLVHVLTYFCSF
+GGELAINAILSSYYLKNFPELGQTGASNYAAIFGFLNFITRPLGGVVSDLLYNAAGSGPRGLWLKKGWI
+HVCGIATGALLILIGQLNPHHQPTMLGLVIFMAFFHEAGNGANFALIPHVHPHANGLVSGITGAGGNLG
+GVVFAVVFRFVGGGTGYATGFWIIGIVHIAINIAMAWIKPLPKGQIGGY
>Phchr2_2932727
MVYFPFARPQRSSVAPAETADALDTAAAAQIGHPEKLSLWERLTTVRINPANNKCTTLPILKLNNPYSIN
+FHLSWLGFWVAFLSWFAFSPLVPEAVKNDLKLTQKQIGNSNIVSLCSTLLVRVIVGPLCDRFGPRKVMA
+GLLIVGAIPSGLAGTVSSAQGLYVIRFFIGILGGTFVPCQAWTTAFYDTSIVGRANALVAGWGNSGGGF
+TFIIMVALYDRLRSDGLSPHSAWRAAFAIVPVPILFFVAIITLLVGTDHPNGKWADRHKNAALVPAALT
+DGSPRGSDDIEAIREIAPTQDGPKEKTENEKDAVNVDVTAVMPSRPPSIRQDSVPLTWKIALDVVLNPL
+TWLPALAYMSSFGYELAIDANLANVYFGLYNKTKGFGQTRCGYIASIFGLLNVFSRPLGGYMGDVVYRR
+WGVPGKKYLVLALGVLQGALSLAWGLYLDRHAASLAVVIVLMILTAAVDELGNGANFSLVPHCNPSSNG
+VMTGIVGAMGNLGGVWFALMFRFQPSPFGKAFWIAGVVTMVTSVLLVVIRVPRK
>Thiar1_121068
MGLKFHHLYASPEVNPASLKARSIPFFNPVDIYGRVFFFSWFGFMVAFWAWAAFPPLLTKVIQKELGLTP
+AEVANSNIISPCAALLVRLVAGPLCDQFGPRIVFGGLLLVGSIPLGLAPLVHNAAGLYVSRFFIGILGG
+AFVPCQVWSTGFFDKNIVGTANALAGGFGTAGGGITYFVMPAVYDAFVSYGHTAGEAWRLAFIVPLAVV
+ITTGTALIVLCPDTPTGKWSERHLANSTPDDGSPSHNMTPANCSVIDVPGRITDKLPSPTAPSLSLSSR
+QDPESGRQKPSEKNSHLANHKPMLDPESQLPIITLATAANTTKSEVVQKPTLSQAIRVAFSPQAIFHLL
+TYMCSFGSELAINMIISSYYVKNFPSLSQTSAATFAALFGFQNFVTRPLGGVVSDLLYNYCGRSLWLKK
+LWIVSCGVLAGVFLIVTGRLDPHGEGAMFGLVAVAGVFLQAGNGANFSLVPHVHPFANGILSGLTGAGG
+NFGGVVFSVIFRFMDGGTNYAKGFWVIGVVNLVVCLGLSWIPPLPKGQVGGH
>Thiar1_767720
MGFKPSDLWRTPEVNPVNKKARSVPILNPIDRHGRVFFFSWMGFMLAFWAWYTFPPLLSVTIKKDLNLTS
+EEVANSNIVSLVATLLVRFAAGPLCDLLGSRKVFSLILLVGSIPIGLAPLIKDATGLYIIRFFIGILGG
+SFVPCQVWCTGWFDKNVVGTANALSGGWGNAGGGITYFIMPAVYDSLVHRHGHTSGEAWRITFIVPLVC
+LITCGLGLLFLCDDTPMGKWSDRHENVQQNLETQGISGKVVAITGNIADREPPSSSTSPSRAPSDIEKA
+DPEKPKLTGDLTVTEAIETAQGETVVKPTFRDSLPVVFSLHALFHTATYACSFGGELAVNSILGAYYLK
+NFPHLGQTNASNYAALFGFLNFVTRPLGGVVGDMLYNYFGRNLWLKKIWIHVCGLLTGALLILIGMLDP
+HDLGTMVGLIVLMAVFHEAGNGANFALVPHVYPHANGVLSGLTGAGGNLGGVVFAIIFRYMDNGTNYAK
+GFWVIGIMHIILNLAVCWIPPIPKGQIGGR
>Micmi1_478558
MPAIFDHFVGHYKLSPHDAWRRAFFVPFAIIVGTAILMVVLCPDTPVGKWSERHEAVEANLRVIHEQGRH
+VPQSSVVYGESTGASPADSTEKVDKLAITKDVEFGKGEVTEIDAEYAHEVIEKPSAKEIFKVFISPQTV
+ALMACYFNSFGSELAINSVLGAYYLKNFPKLGQTSSGRWAAMFGLLNVYGRPLGGIISDIIYKYTKGNL
+WAKKIWIHFLGVTMGVFMLAIGLANSHNQHTMIGLVAGLAFFMDASNGANFALVPHVHPQANGIVSGFV
+GAVGNFGGVIGAIIFRYNVTNYGKSIWILGVIAIVMNLSVAWIRPIPKGQIGGR
>Micmi1_311120
MGFNPAVLFKAPQVNPITKKARSIPILNPFNVYGRVFFFSWWGFMVAFLSWYAWSPLIGETIKADLKLTQ
+AQIANSNILALVATLLVRCIAGPLCDKFGPRLVFAGVLLAGAVPTAFAFAIKNAAGLIVLRFFVGILGG
+SFVPCQVWSTGFFDKNIVGTANSITGGFGNAGGGITYFVMPAIFDTFVNHYGMTKHKAWRMAFFVPFGM
+IVGTAILMLLLTPDTPVGKWKDRHAAVEANLRAEHEAGRIIPHTGLGEAHHAHGPPLVLDDKKNDSTSD
+VEHGTGEVVAVDTEYSHEVVMSPTFKEIVQIALSPQTLTLMACYFCSFGAELAINSILGAYYLKNFPKL
+GQSGSGDWAAMFGLLNVVFRPMGGMMSDALYKFTGGKVWSKKILVHVMGVLMGMFMIIIGATDSHNRST
+MVGLIAGLAFFLEAGNGANFGLVPHVHPYANGVVSGFTGASGNLGGIIGAIIFRYNGLHYGKSIWIFGI
+IAIVLNLAVCWIRPVPKGQIGGR
>Aspnid1_6363
MKPTQVLRLAVAAPDVNPQTRKARSIPVLNPFDLYGRVFFFSWIGFLVAFLSWYAFPPLLSVTIKKDLHM
+SQDDVANSNIVALLGTFVMRFIAGPLCDRFGPRLVFVGLLICGAVPTAMAGLVTTPQGLIALRFFVGIL
+GATFVPCQVWCTGFFDKNIVGTANSLAGGFGNAGGGITYFVMPAIYDSFVHDRGLTPHKAWRVSYIVPF
+IIIVSIALAMLFTCPDTPTGKWADREKTSGQSIVDLSSTPNASSANSINISSDEKKAVHPEVTDSEAQV
+HVRAGQIESSDAVIEAPTIKRYLSIALDPSALAVAVPYACSFGAELAINSILGAYYLLNFPLLGQTQSG
+RWASMFGLVNVVFRPMGGFIADLIYARTNSVWAKKMWLVVLGLAMSGMAILIGFLDPHRESVMFGLVVL
+MAFFIAASNGANFAIVPHVHPSANGIVSGIVGGMGNFGGIIFAIVFRYNGTQYHRSLWIIGFIILGCTL
+FFSWVRPVPKQNH
>Aspnid1_5705
MDFAKLLVASPEVNPNNRKALTIPVLNPFNTYGRVFFFSWFGFMLAFLSWYAFPPLLTVTIRDDLDMSQT
+QIANSNIIALLATLLVRLICGPLCDRFGPRLVFIGLLLVGSIPTAMAGLVTSPQGLIALRFFIGILGGT
+FVPCQVWCTGFFDKSIVGTANSLAAGLGNAGGGITYFVMPAIFDSLIRDQGLPAHKAWRVAYIVPFILI
+VAAALGMLFTCDDTPTGKWSERHIWMKEDTQTASKGNIVDLSSGAQSSRPSGPPSIIAYAIPDVEKKGT
+ETPLEPQSQAIGQFDAFRANAVASPSRKEAFNVIFSLATMAVAVPYACSFGSELAINSILGDYYDKNFP
+YMGQTQTGKWAAMFGFLNIVCRPAGGFLADFLYRKTNTPWAKKLLLSFLGVVMGAFMIAMGFSDPKSEA
+TMFGLTAGLAFFLESCNGAIFSLVPHVHPYANGIVSGMVGGFGNLGGIIFAIIFRYSHHDYARGIWILG
+VISMAVFISVSWVRPVPKSQMRE
>PenroP1_04323
MAPGFFKRLYVSPEINPSTHKAKSIPVLNPFDKYGRVFFFSWLGFMVAFLSWYAFPPLLNVTIKKDLKMT
+QEDVANSNIVALLATLLVRFVAGPLCDRYGPRLVFVGLLLCGAIPTAMAGLVTGPKGLIALRFFIGILG
+GTFVPCQVWCTGFFDKSIVGAANSLSGGWGNAGGGITYFVMPAVYDSLVQSRGIPSHKAWRIAYVIPFI
+IITAVALCMLVLCEDTPTGKWSERNLWAKDSNGTTSAPNANIVDINSCTSSSGTMTPHNAATIDSEKKG
+TQSPHVIDDTPATGQIDIFRQETVVSPTRREALNVAMSLSTMALAIPYACSFGSELAINSMLGSYYTEQ
+FPHMSQTKSGQWAAMFGLLNVVCRPAGGLFGDLVYLYTGTAWSKKILIAFLGIGMGAFQLAIGLSNPST
+EATMFGLVAGLAFFIEASNGANFALVPHVYPFANGIVSGIVGGLGNLGGIIFAIIFRYNGSNYGRSLWI
+IGVISLATNLAVSWIRPIPKSQTLS
>Pyrtt1_5571
MPFAISMLWSAPELNPYNKKARSIPVLNPVNKYGRVFFFSWLGFFIAFWSWYAFPPLLSKSIKADMHLSQ
+DQIANSNIVALCATLLVRFIAGPMCDHFGPRITFASLLFAGAIPTALAGTAHNATGLYFIRFFVGILGG
+TFVPCQVWTTGFYDKNVVGSANALVGGWGNSGGGITYFVMPVIYDSLKSNQGLSSHVAWRVSFIVPFVL
+ISACAVALLLLTEDTPTGKWSERGVTVVSGDQPNQAGHSIVPTTGALDDKPSTAASLSSNDEKKYENTA
+ADVETANGDVQIMDEVQHEVVVKPSLKEGLKVMFSLQTGALCAGYFCSFGGELAINSILGAYYLKNFPY
+LGQTQSGRWAAMFGLLNVITRPLGGFIADLLYQTTGHNLWAKKLWINFVGIMTGVMCIIIGKLDPHNLS
+EMIGLIALMAIFLEAGNGANFALVPHVHPHANGVLSGIVGATGNFGGIIFAIIFRYHKTNYSQVFWIIG
+IMIIALNCAFIWVRPIPKNQIGGR
>Sodal1_324937
MGLDYLWKAPEVNPINLKACRRFETTRKIQGCPANKLQQARSVPVLNPFNKYGAAFFFSWMGFMIAFWAW
+YTFPPLLTVTIRDDLNLTPAQVANSNIVSLSSTLLMRLLAGPACDKFGSRLVFGGLLLLGALPVGLAPL
+VQDATGLYISRFFIGVLGATFVPCQVWCTGFFDKNIVGTANALAGGWGNAGGGITYFVMPAVFDSFRDR
+GYSPAVAWRLTFIVPLICIIVCGVGLILCCEDTPMGKWSDRHLHIQENLRNQGVEDATLVNVVNVPGGI
+TDRPEPSPAPASADEERNSSTKSRKDESHFDAQAIDLSRAEMLETAQGETVAKPSLRDSLRVAVSPQTI
+FHVLTYACSFGGELAINAILSSYYLKNFPHLGQTGASNWAAMFGFLNFVTRPLGGIVGDLLYNYVGRDL
+WWKKGWIVLCGVATGVLLVLIGQLDPHHEPTMFGLIFLMAVFHEAGNGANFALVPHVHPAANGVLSGLT
+GAGGNLGGVVFAIIFRFMDGGTDYAKGFWVIGCMHIGLNLLVSWIPPLPKGQIGGH
>Aspfl1_27006
MDSVKLLFLSPEVNPSNRKARSIPILNPFDKYGRVYFFSWLGFMVAFLSWYAFPPLLTVTIRKDLKMTQP
+EVANSNIVALLATLLVRFVAGPLCDRFGPRLVFIGLLLCGSIPTAMAGLVTNAQGLIALRFFVGILGGT
+FVPCQVWCTGFFDKKIVGTANSLAAGWGNAGGGITYFVMPAIFDSLVHNQGLPAHKAWRVAYIVPFIII
+VVIAVAMFFTCEDTPTGKWSERHLWAEETSRFEGNIVNINSGISSSHPSSPPSTTNIVADLEKKGNPSP
+PESIAPMPGQLESLRTDTVVAPTFKEAMNVLLSLSTAAVAIPYACSFGAELAINSILGDFYAENFPYMG
+QTKTGQWAAMFGLLNVICRPAGGFIADLLYRHTQSVWSKKILLSFLGVGMGAFQLALGFSNPKSEATMF
+GLTAGLAFFLEACNGANFAVVPHVHPFANGIVSGAVGGMGNLGGIIFAIIFRYNGSHYARSLWIIGIIA
+IAANLAVSWIRPVPRPQMV
>Necha2_90170
MGFQIAHMWKAPEVNPISRKARSVPVLNPVDIYGRVFFFSWMGFMLAFWAWYTFPPLLTVTIKKDLHLTP
+AQIANSNIVSLSATFFLRFITGPLCDQFGPRRVFAYLILLGCFPIGLAPLVKNATGLYISRFFIGILGA
+TFVPCQVWCTGFFDKNIVGTANALAGGWGNAGGGITYFIMPAVFDSLVAHQGLTPSKAWRVTFIVPLIC
+LIVCGVGMLLLCPDSPMGDWDDQAQQVRKNMEEHGVSTSDEITPVGTPDRSGSDEENSAGCEKDVKVGD
+HEHSITRNEAMEIAQGEIVVKPSLKEALPVLYSPQTFFHVATYACSFGGELAINAVLSAYLKKNFPHLD
+QTKASNYAAIFGFLNFVNRPLGGVIADILYNKFGRNLWLKKGWITVCGLLTGALLILIGRVNPAESNGG
+TVGTFVGLIVLMSVFHEAGNGANFALVPHVHPFANGILSGLTGGGGNLGGVIFAIIFRFMNQGKDFAMG
+FWVIGIIHIALNLAVCWIPPLPKGQVGGH
>Conli1_4928
MGVNIKFTDLYKAPDVNPVNRKAHSIPALNPINMYGRVFFFSWFGFMIAFWAWYTFPPLLTVTIKADLHL
+TPAQVANSNIVSLVATLFIRFVAGPLCDMYGPRRVFAGTLLVGALPLGLAPLIHNATGLYVSRFFIGIL
+GGSFVPCQVWSTGFFDKNIVGTANALTGGFGNAGGGITYFIMPAVYDSFVHMGHTPHQSWRLTFIVPLI
+MAIATGLSLLLLCPDTPMGKWSERHLHVQENLQLHGVAERVVDIPGGITDKATPSESHVSDGEEKKPVT
+YDHEAALSKSEMIETAQGETIQKPTLREALPVIFSQQTAFHFLTYFCSFGGELAINAILSSYYLKNFPT
+LGQTKASNWAAMFGFLNFVTRPLGGVVSDLLYNLAGRNLWLKKGWITTCGVATGALLILIGQLNSHHQS
+TMYGLVALMAFFLEAGNGANFALVPHVHPFANGILSGVTGAGGNLGGVVFAVIFRFMGGGTNYAKAFWV
+IGVIHIAMNLSVCWIRPLPKGQIGGH
...ext
[download]

In reply to Re^4: Counting matches by Nicpetbio23!
in thread Counting matches by Nicpetbio23!

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