You could do worse than check out the bioperl pages. Either at CPAN or Bioperl.
Either site should lead you to Ewan Birney's Bio::OntologyIO::simpleGOparser or to some of the other work on handling GO files. The Bioperl community is very obliging and usually pretty handy at saving you from reiventing the wheel
Hope this helps
A.A.
In reply to Re: Network format for Gene Ontology
by aging acolyte
in thread Network format for Gene Ontology
by matth
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