Hey monks,

Updating on some chatter yesterday in the CB: I've -again- a page I'm parsing. The parsing goes wel (with, I admit, a big ugly regex that probably could've been written much shorter), but now I want to assign a rank to each match, ie. the first match should get rank 1, the second match rank 2, ... the nth match should get rank n.

I came up with this:
my $ranking_dgp = 0; do { my $gene = $1; my $chromosone = $2; my $score_dgp = $3; $ranking_dgp = $ranking_dgp + 1; push @gene_score, [ $gene, $chromosone, $score_dgp, $ranking_d +gp ]; } while ( $text =~ m{gene\=(ENSG\d+).*?<TD>\s+(\d+|X|Y)\s+</TD>.*? +<TD>.*?<TD>.*?<TD>.*?<TD>\s(\d.\d+)\s\<\/TD\>}gsm); print Dumper @gene_score;

but it's one off: my first match gets rank 2. When I look at my output, I also see and understand why, but I can't think of a better way to do it.

$VAR1 = [ undef, undef, undef, '1' ]; $VAR2 = [ 'ENSG00000165659', '13', '0.738681', 2 ]; $VAR3 = [ 'ENSG00000184226', '13', '0.627447', 3 ];

In reply to adding rank to a match in while loop. by BioGeek

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.