Thank you, perlpie

Like you mentioned, I am trying to generate the reference string given only the input string and CIGAR ID. I need to fill in with X's with deletion, and I need to get rid of extra letters in the string with inserted letters to make them as similar as reference.. (basically the letters' locations need to be conserved by filling letter X or removing excessive letters that do not match) I hope this makes much more clear now

In reply to Re^2: string manipulation with Regex by FluffyBunny
in thread string manipulation with Regex by FluffyBunny

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